Comparison between duranensis and cardenasii genomes

• Start a new session
• Select Dotplot view and launch.
• At Select assemblies for dotplot view.
  • Ardu.gnm2 and Araca.gnm1. Open.
• At matrix view
  • Zoom until the two needed Chrs are visible.
  • Select the entire rectangle(click-drag) representing the two Chrs for comparison.
  • Select zoom in. An empty chart appears.
  • Click tract selector(☰)
  • In the “Available tracks panel” (right) choose aradu.gnm2-x-araca.gnm1.
• Dotplot of the selected region or Chr appears.
  Next: (Optional)if need to add synteny view of the region
• Select a region from dotplot (click-drag).
  • Select open linear synteny viewi from popup options.
  • A new view window appears below with synteny view.